Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CHMP2BQ9UQN3 AL355312.1-201ENST00000407115 2176 ntBASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 C2orf69P3-201ENST00000565542 1120 ntBASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP2BQ9UQN3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 SIRPAP1-201ENST00000448467 1770 ntBASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2BQ9UQN3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 INGX-201ENST00000359239 846 ntBASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 MIR718-201ENST00000390190 70 ntBASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2BQ9UQN3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms