Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 GUSBP12-201ENST00000513727 720 ntBASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 AC087388.1-201ENST00000571370 1112 ntBASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 AL353801.3-201ENST00000609898 542 ntBASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGC3Q9UN70 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 DDX43P3-201ENST00000441064 443 ntBASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGC3Q9UN70 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
PCDHGC3Q9UN70 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 PCED1CP-201ENST00000419887 785 ntBASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 KRT18P35-201ENST00000510488 1269 ntBASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 AC090616.6-201ENST00000582640 721 ntBASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 AC009949.1-201ENST00000623048 1830 ntBASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGC3Q9UN70 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGC3Q9UN70 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms