Protein–RNA interactions for Protein: Q9UJT0

TUBE1, Tubulin epsilon chain, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1Q9UJT0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 PRELID1P1-202ENST00000567272 903 ntBASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 AL691432.3-201ENST00000621860 400 ntBASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TUBE1Q9UJT0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 AC099343.3-201ENST00000605834 2503 ntBASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBE1Q9UJT0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 MIR149-201ENST00000384879 89 ntBASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 AC009102.3-201ENST00000623118 1491 ntBASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 Z83836.1-201ENST00000624605 1642 ntBASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.53■□□□□ 0.88
TUBE1Q9UJT0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 AC006116.8-202ENST00000587620 1550 ntBASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 TPM4P1-201ENST00000436100 807 ntBASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TUBE1Q9UJT0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms