Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 AC018712.1-201ENST00000455767 687 ntBASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 AF228730.7-201ENST00000641842 219 ntBASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.35■□□□□ 0.37
LRIT1Q9P2V4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 RNF165-205ENST00000588679 2904 ntBASIC17.34■□□□□ 0.37
LRIT1Q9P2V4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.33■□□□□ 0.37
LRIT1Q9P2V4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRIT1Q9P2V4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRIT1Q9P2V4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LRIT1Q9P2V4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
LRIT1Q9P2V4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.33■□□□□ 0.37
LRIT1Q9P2V4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRIT1Q9P2V4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.33■□□□□ 0.37
LRIT1Q9P2V4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.33■□□□□ 0.37
LRIT1Q9P2V4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRIT1Q9P2V4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LRIT1Q9P2V4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRIT1Q9P2V4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRIT1Q9P2V4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 RPS2P28-201ENST00000314255 741 ntBASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT1Q9P2V4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms