Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNTN3Q9P232 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNTN3Q9P232 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.33■□□□□ 0.68
CNTN3Q9P232 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNTN3Q9P232 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.33■□□□□ 0.68
CNTN3Q9P232 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.33■□□□□ 0.68
CNTN3Q9P232 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CNTN3Q9P232 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CNTN3Q9P232 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CNTN3Q9P232 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNTN3Q9P232 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNTN3Q9P232 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNTN3Q9P232 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNTN3Q9P232 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.33■□□□□ 0.68
CNTN3Q9P232 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.32■□□□□ 0.68
CNTN3Q9P232 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.32■□□□□ 0.68
CNTN3Q9P232 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.32■□□□□ 0.68
CNTN3Q9P232 AC096633.1-201ENST00000422446 749 ntBASIC19.32■□□□□ 0.68
CNTN3Q9P232 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.32■□□□□ 0.68
CNTN3Q9P232 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CNTN3Q9P232 AC104692.2-201ENST00000603054 253 ntBASIC19.32■□□□□ 0.68
CNTN3Q9P232 AL031008.1-201ENST00000619963 541 ntBASIC19.32■□□□□ 0.68
CNTN3Q9P232 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.32■□□□□ 0.68
CNTN3Q9P232 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.32■□□□□ 0.68
CNTN3Q9P232 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.32■□□□□ 0.68
CNTN3Q9P232 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CNTN3Q9P232 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CNTN3Q9P232 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.32■□□□□ 0.68
CNTN3Q9P232 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CNTN3Q9P232 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.32■□□□□ 0.68
CNTN3Q9P232 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTN3Q9P232 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTN3Q9P232 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNTN3Q9P232 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTN3Q9P232 AIRN-201ENST00000601203 4374 ntBASIC19.31■□□□□ 0.68
CNTN3Q9P232 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNTN3Q9P232 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNTN3Q9P232 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTN3Q9P232 AC079781.3-201ENST00000449110 356 ntBASIC19.31■□□□□ 0.68
CNTN3Q9P232 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNTN3Q9P232 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTN3Q9P232 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNTN3Q9P232 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTN3Q9P232 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.31■□□□□ 0.68
CNTN3Q9P232 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTN3Q9P232 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNTN3Q9P232 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTN3Q9P232 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNTN3Q9P232 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTN3Q9P232 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTN3Q9P232 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTN3Q9P232 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTN3Q9P232 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNTN3Q9P232 AC007967.3-201ENST00000434308 558 ntBASIC19.3■□□□□ 0.68
CNTN3Q9P232 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTN3Q9P232 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTN3Q9P232 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.3■□□□□ 0.68
CNTN3Q9P232 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.3■□□□□ 0.68
CNTN3Q9P232 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.3■□□□□ 0.68
CNTN3Q9P232 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CNTN3Q9P232 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.3■□□□□ 0.68
CNTN3Q9P232 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.3■□□□□ 0.68
CNTN3Q9P232 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.3■□□□□ 0.68
CNTN3Q9P232 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.3■□□□□ 0.68
CNTN3Q9P232 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTN3Q9P232 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNTN3Q9P232 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CNTN3Q9P232 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.3■□□□□ 0.68
CNTN3Q9P232 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.3■□□□□ 0.68
CNTN3Q9P232 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms