Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 MIR149-201ENST00000384879 89 ntBASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 AL512604.3-201ENST00000569583 964 ntBASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 AC012306.2-201ENST00000609350 630 ntBASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 AC008622.2-201ENST00000617006 1229 ntBASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 PRORSD1P-202ENST00000563365 2154 ntBASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 AC012317.2-201ENST00000623305 2251 ntBASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.99□□□□□ -0.01
LIN7CQ9NUP9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 HMGA1P5-201ENST00000412453 271 ntBASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 AC211429.1-201ENST00000415277 523 ntBASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 AP003041.3-201ENST00000527151 707 ntBASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 MIR3180-5-201ENST00000583743 153 ntBASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIN7CQ9NUP9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms