Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 MIR219A2-201ENST00000608502 1504 ntBASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC9.2□□□□□ -0.94
CDC42SE1Q9NRR8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 AP002414.2-201ENST00000591780 3365 ntBASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 FLJ13224-201ENST00000313737 1514 ntBASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 DPP3P2-201ENST00000416030 1696 ntBASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CDC42SE1Q9NRR8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 AC007191.1-201ENST00000623179 2995 ntBASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 AC010327.5-201ENST00000586923 3061 ntBASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms