Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF41Q9H4P4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 KRT18P55-202ENST00000578578 1546 ntBASIC21.19■□□□□ 0.98
RNF41Q9H4P4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 AC138932.1-201ENST00000534164 6830 ntBASIC21.19■□□□□ 0.98
RNF41Q9H4P4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 AC104819.1-201ENST00000504587 486 ntBASIC21.19■□□□□ 0.98
RNF41Q9H4P4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 AP005901.3-202ENST00000581653 237 ntBASIC21.19■□□□□ 0.98
RNF41Q9H4P4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF41Q9H4P4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 AC091607.1-201ENST00000490318 1060 ntBASIC21.18■□□□□ 0.98
RNF41Q9H4P4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 AC074051.2-201ENST00000565115 352 ntBASIC21.18■□□□□ 0.98
RNF41Q9H4P4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 AC116407.2-201ENST00000613639 860 ntBASIC21.18■□□□□ 0.98
RNF41Q9H4P4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 KRT8P47-201ENST00000604727 1398 ntBASIC21.18■□□□□ 0.98
RNF41Q9H4P4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF41Q9H4P4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 IGHV3-47-201ENST00000425060 335 ntBASIC21.17■□□□□ 0.98
RNF41Q9H4P4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 MIR3652-201ENST00000579335 131 ntBASIC21.17■□□□□ 0.98
RNF41Q9H4P4 AC005336.2-201ENST00000593183 939 ntBASIC21.17■□□□□ 0.98
RNF41Q9H4P4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF41Q9H4P4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms