Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.39■□□□□ 0.69
NXF3Q9H4D5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.39■□□□□ 0.69
NXF3Q9H4D5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 RBM17P3-201ENST00000417687 1192 ntBASIC19.38■□□□□ 0.69
NXF3Q9H4D5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NXF3Q9H4D5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.37■□□□□ 0.69
NXF3Q9H4D5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 RNA5SP419-201ENST00000515908 135 ntBASIC19.37■□□□□ 0.69
NXF3Q9H4D5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.37■□□□□ 0.69
NXF3Q9H4D5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 REXO1L9P-201ENST00000604264 2108 ntBASIC19.36■□□□□ 0.69
NXF3Q9H4D5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 KRT18P67-201ENST00000432816 1264 ntBASIC19.36■□□□□ 0.69
NXF3Q9H4D5 ABCD1P5-201ENST00000445663 754 ntBASIC19.36■□□□□ 0.69
NXF3Q9H4D5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 AC009113.1-201ENST00000570267 2443 ntBASIC19.36■□□□□ 0.69
NXF3Q9H4D5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 AC090164.3-201ENST00000610780 2143 ntBASIC19.36■□□□□ 0.69
NXF3Q9H4D5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NXF3Q9H4D5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.35■□□□□ 0.69
NXF3Q9H4D5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
NXF3Q9H4D5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.35■□□□□ 0.69
NXF3Q9H4D5 AP005117.1-201ENST00000584346 1413 ntBASIC19.35■□□□□ 0.69
NXF3Q9H4D5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.35■□□□□ 0.69
NXF3Q9H4D5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NXF3Q9H4D5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.35■□□□□ 0.69
NXF3Q9H4D5 AC097374.2-201ENST00000618617 1306 ntBASIC19.35■□□□□ 0.69
NXF3Q9H4D5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NXF3Q9H4D5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NXF3Q9H4D5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NXF3Q9H4D5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.35■□□□□ 0.69
NXF3Q9H4D5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NXF3Q9H4D5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms