Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 LINC01238-205ENST00000567549 1107 ntBASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 AC108860.2-201ENST00000562760 2183 ntBASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 AL023806.1-201ENST00000603994 1649 ntBASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXP3Q9BZS1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
FOXP3Q9BZS1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 YBX1P2-201ENST00000489612 999 ntBASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 AL358472.4-201ENST00000633140 710 ntBASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
FOXP3Q9BZS1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 FZD10-202ENST00000539839 3282 ntBASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 RNF152P1-201ENST00000397754 604 ntBASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 DUTP2-201ENST00000519164 463 ntBASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 AC092338.2-201ENST00000568827 1415 ntBASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXP3Q9BZS1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 MIR3180-4-201ENST00000582223 153 ntBASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms