Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 KRT8P50-201ENST00000562022 1438 ntBASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 HLA-F-220ENST00000434407 884 ntBASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 MIR3180-4-201ENST00000582223 153 ntBASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 AC011498.5-201ENST00000592027 486 ntBASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 AL162741.1-201ENST00000565563 1558 ntBASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
PCGF1Q9BSM1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 AP000593.1-201ENST00000393668 712 ntBASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 PVRIG2P-201ENST00000435460 978 ntBASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 HCG4P8-203ENST00000443049 980 ntBASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 BX276092.5-203ENST00000456199 560 ntBASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCGF1Q9BSM1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCGF1Q9BSM1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms