Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.85■□□□□ 0.61
SMOQ99835 FLJ13224-201ENST00000313737 1514 ntBASIC18.84■□□□□ 0.61
SMOQ99835 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.84■□□□□ 0.61
SMOQ99835 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SMOQ99835 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.84■□□□□ 0.61
SMOQ99835 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.84■□□□□ 0.61
SMOQ99835 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.84■□□□□ 0.61
SMOQ99835 AC138028.4-201ENST00000564984 1845 ntBASIC18.84■□□□□ 0.61
SMOQ99835 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.84■□□□□ 0.61
SMOQ99835 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SMOQ99835 AC009533.2-201ENST00000543664 586 ntBASIC18.84■□□□□ 0.61
SMOQ99835 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.84■□□□□ 0.61
SMOQ99835 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.84■□□□□ 0.61
SMOQ99835 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.84■□□□□ 0.61
SMOQ99835 AC114341.1-201ENST00000618070 349 ntBASIC18.84■□□□□ 0.61
SMOQ99835 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SMOQ99835 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMOQ99835 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.84■□□□□ 0.61
SMOQ99835 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.84■□□□□ 0.61
SMOQ99835 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.84■□□□□ 0.61
SMOQ99835 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.84■□□□□ 0.61
SMOQ99835 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.84■□□□□ 0.61
SMOQ99835 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.84■□□□□ 0.61
SMOQ99835 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMOQ99835 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMOQ99835 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMOQ99835 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.83■□□□□ 0.61
SMOQ99835 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMOQ99835 AC097374.2-201ENST00000618617 1306 ntBASIC18.83■□□□□ 0.61
SMOQ99835 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.83■□□□□ 0.61
SMOQ99835 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.83■□□□□ 0.6
SMOQ99835 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMOQ99835 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMOQ99835 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.83■□□□□ 0.6
SMOQ99835 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.83■□□□□ 0.6
SMOQ99835 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
SMOQ99835 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMOQ99835 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.83■□□□□ 0.6
SMOQ99835 KRT16P4-201ENST00000453883 522 ntBASIC18.83■□□□□ 0.6
SMOQ99835 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.83■□□□□ 0.6
SMOQ99835 MIR5100-201ENST00000579544 119 ntBASIC18.83■□□□□ 0.6
SMOQ99835 AC011467.2-201ENST00000598425 242 ntBASIC18.83■□□□□ 0.6
SMOQ99835 AL121894.2-201ENST00000602977 491 ntBASIC18.83■□□□□ 0.6
SMOQ99835 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.83■□□□□ 0.6
SMOQ99835 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMOQ99835 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMOQ99835 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMOQ99835 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.83■□□□□ 0.6
SMOQ99835 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMOQ99835 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SMOQ99835 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SMOQ99835 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
SMOQ99835 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.82■□□□□ 0.6
SMOQ99835 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SMOQ99835 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SMOQ99835 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.82■□□□□ 0.6
SMOQ99835 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SMOQ99835 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 AC096633.1-201ENST00000422446 749 ntBASIC18.82■□□□□ 0.6
SMOQ99835 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.82■□□□□ 0.6
SMOQ99835 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.82■□□□□ 0.6
SMOQ99835 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.82■□□□□ 0.6
SMOQ99835 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.82■□□□□ 0.6
SMOQ99835 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SMOQ99835 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.82■□□□□ 0.6
SMOQ99835 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.82■□□□□ 0.6
SMOQ99835 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.82■□□□□ 0.6
SMOQ99835 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SMOQ99835 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.82■□□□□ 0.6
SMOQ99835 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.82■□□□□ 0.6
SMOQ99835 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMOQ99835 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SMOQ99835 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMOQ99835 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms