Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AL805961.1-202ENST00000641562 540 ntBASIC5.43□□□□□ -1.54
HMCN1Q96RW7 AC132938.5-201ENST00000624980 1813 ntBASIC5.43□□□□□ -1.54
HMCN1Q96RW7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMCN1Q96RW7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMCN1Q96RW7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
HMCN1Q96RW7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC5.43□□□□□ -1.54
HMCN1Q96RW7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HMCN1Q96RW7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC5.43□□□□□ -1.54
HMCN1Q96RW7 AL135744.1-201ENST00000565098 629 ntBASIC5.43□□□□□ -1.54
HMCN1Q96RW7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMCN1Q96RW7 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC5.43□□□□□ -1.54
HMCN1Q96RW7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMCN1Q96RW7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMCN1Q96RW7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
HMCN1Q96RW7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMCN1Q96RW7 AL353593.2-201ENST00000602529 1483 ntBASIC5.43□□□□□ -1.54
HMCN1Q96RW7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC5.43□□□□□ -1.54
HMCN1Q96RW7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC148477.5-201ENST00000625164 1645 ntBASIC5.42□□□□□ -1.54
HMCN1Q96RW7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 TSSK5P-201ENST00000423978 907 ntBASIC5.42□□□□□ -1.54
HMCN1Q96RW7 TTTY23B-201ENST00000442790 549 ntBASIC5.42□□□□□ -1.54
HMCN1Q96RW7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC105129.2-201ENST00000559536 390 ntBASIC5.42□□□□□ -1.54
HMCN1Q96RW7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 CYP51A1P1-201ENST00000492267 1507 ntBASIC5.42□□□□□ -1.54
HMCN1Q96RW7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC002056.1-201ENST00000395613 760 ntBASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 INE1-201ENST00000456273 945 ntBASIC5.42□□□□□ -1.54
HMCN1Q96RW7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC079140.1-201ENST00000508039 487 ntBASIC5.42□□□□□ -1.54
HMCN1Q96RW7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC026120.1-201ENST00000611536 926 ntBASIC5.42□□□□□ -1.54
HMCN1Q96RW7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC006116.8-202ENST00000587620 1550 ntBASIC5.42□□□□□ -1.54
HMCN1Q96RW7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AL020989.1-201ENST00000422979 469 ntBASIC5.42□□□□□ -1.54
HMCN1Q96RW7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 RNA5SP412-201ENST00000516234 123 ntBASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AP001258.2-201ENST00000529891 490 ntBASIC5.42□□□□□ -1.54
HMCN1Q96RW7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMCN1Q96RW7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms