Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
ODF3Q96PU9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ODF3Q96PU9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 SIRPAP1-201ENST00000448467 1770 ntBASIC13.3□□□□□ -0.28
ODF3Q96PU9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 AC133963.1-201ENST00000504166 1679 ntBASIC13.3□□□□□ -0.28
ODF3Q96PU9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ODF3Q96PU9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
ODF3Q96PU9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.29□□□□□ -0.28
ODF3Q96PU9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ODF3Q96PU9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.29□□□□□ -0.28
ODF3Q96PU9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.29□□□□□ -0.28
ODF3Q96PU9 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.29□□□□□ -0.28
ODF3Q96PU9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.29□□□□□ -0.28
ODF3Q96PU9 SLC25A3P1-201ENST00000443844 931 ntBASIC13.29□□□□□ -0.28
ODF3Q96PU9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 AC093827.2-201ENST00000512654 315 ntBASIC13.29□□□□□ -0.28
ODF3Q96PU9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
ODF3Q96PU9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.29□□□□□ -0.28
ODF3Q96PU9 GCSHP2-201ENST00000560971 527 ntBASIC13.29□□□□□ -0.28
ODF3Q96PU9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.29□□□□□ -0.28
ODF3Q96PU9 AL139384.1-201ENST00000612143 3047 ntBASIC13.29□□□□□ -0.28
ODF3Q96PU9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
ODF3Q96PU9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.29□□□□□ -0.28
ODF3Q96PU9 AC012317.2-201ENST00000623305 2251 ntBASIC13.29□□□□□ -0.28
ODF3Q96PU9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ODF3Q96PU9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.29□□□□□ -0.28
ODF3Q96PU9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ODF3Q96PU9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 AL138688.1-201ENST00000624851 1594 ntBASIC13.28□□□□□ -0.28
ODF3Q96PU9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms