Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 SLC29A4P1-201ENST00000398760 971 ntBASIC13.63□□□□□ -0.23
AP1S3Q96PC3 AC026185.1-201ENST00000445748 174 ntBASIC13.63□□□□□ -0.23
AP1S3Q96PC3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 PNMA6B-201ENST00000538162 1200 ntBASIC13.63□□□□□ -0.23
AP1S3Q96PC3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 RARRES2P6-201ENST00000567333 442 ntBASIC13.63□□□□□ -0.23
AP1S3Q96PC3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 AC120498.8-201ENST00000614275 531 ntBASIC13.63□□□□□ -0.23
AP1S3Q96PC3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP1S3Q96PC3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP1S3Q96PC3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 AC097658.1-201ENST00000475555 843 ntBASIC13.61□□□□□ -0.23
AP1S3Q96PC3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms