Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 AC138028.4-201ENST00000564984 1845 ntBASIC17.79■□□□□ 0.44
SPDL1Q96EA4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 AC008556.1-201ENST00000610908 2040 ntBASIC17.79■□□□□ 0.44
SPDL1Q96EA4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.79■□□□□ 0.44
SPDL1Q96EA4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.79■□□□□ 0.44
SPDL1Q96EA4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 SLC25A6P5-201ENST00000435663 894 ntBASIC17.78■□□□□ 0.44
SPDL1Q96EA4 AC142086.2-201ENST00000569753 217 ntBASIC17.78■□□□□ 0.44
SPDL1Q96EA4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
SPDL1Q96EA4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms