Protein–RNA interactions for Protein: Q96C10

DHX58, Probable ATP-dependent RNA helicase DHX58, humanhuman

Predictions only

Length 678 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX58Q96C10 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.34■□□□□ 0.85
DHX58Q96C10 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DHX58Q96C10 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DHX58Q96C10 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DHX58Q96C10 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
DHX58Q96C10 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
DHX58Q96C10 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DHX58Q96C10 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DHX58Q96C10 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.34■□□□□ 0.85
DHX58Q96C10 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DHX58Q96C10 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
DHX58Q96C10 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.33■□□□□ 0.85
DHX58Q96C10 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
DHX58Q96C10 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
DHX58Q96C10 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
DHX58Q96C10 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
DHX58Q96C10 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
DHX58Q96C10 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
DHX58Q96C10 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DHX58Q96C10 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DHX58Q96C10 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DHX58Q96C10 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DHX58Q96C10 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DHX58Q96C10 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.33■□□□□ 0.85
DHX58Q96C10 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DHX58Q96C10 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DHX58Q96C10 AL441883.1-201ENST00000566170 1045 ntBASIC20.33■□□□□ 0.85
DHX58Q96C10 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DHX58Q96C10 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DHX58Q96C10 LINC00167-201ENST00000530583 1419 ntBASIC20.33■□□□□ 0.84
DHX58Q96C10 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DHX58Q96C10 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
DHX58Q96C10 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DHX58Q96C10 LINC00602-201ENST00000629776 2065 ntBASIC20.33■□□□□ 0.84
DHX58Q96C10 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DHX58Q96C10 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.33■□□□□ 0.84
DHX58Q96C10 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DHX58Q96C10 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
DHX58Q96C10 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
DHX58Q96C10 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
DHX58Q96C10 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.32■□□□□ 0.84
DHX58Q96C10 AC034232.1-201ENST00000506026 1064 ntBASIC20.32■□□□□ 0.84
DHX58Q96C10 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
DHX58Q96C10 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
DHX58Q96C10 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 AC012306.2-201ENST00000609350 630 ntBASIC20.32■□□□□ 0.84
DHX58Q96C10 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
DHX58Q96C10 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.32■□□□□ 0.84
DHX58Q96C10 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
DHX58Q96C10 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
DHX58Q96C10 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.32■□□□□ 0.84
DHX58Q96C10 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
DHX58Q96C10 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.31■□□□□ 0.84
DHX58Q96C10 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.31■□□□□ 0.84
DHX58Q96C10 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.31■□□□□ 0.84
DHX58Q96C10 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.31■□□□□ 0.84
DHX58Q96C10 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DHX58Q96C10 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.31■□□□□ 0.84
DHX58Q96C10 RASA4DP-201ENST00000460726 1199 ntBASIC20.31■□□□□ 0.84
DHX58Q96C10 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.31■□□□□ 0.84
DHX58Q96C10 COX11P1-201ENST00000489116 835 ntBASIC20.31■□□□□ 0.84
DHX58Q96C10 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.31■□□□□ 0.84
DHX58Q96C10 DUTP2-201ENST00000519164 463 ntBASIC20.31■□□□□ 0.84
DHX58Q96C10 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.31■□□□□ 0.84
DHX58Q96C10 AC005363.2-201ENST00000618631 242 ntBASIC20.31■□□□□ 0.84
DHX58Q96C10 AC079602.3-201ENST00000623931 403 ntBASIC20.31■□□□□ 0.84
DHX58Q96C10 AC097493.4-201ENST00000641197 219 ntBASIC20.31■□□□□ 0.84
DHX58Q96C10 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DHX58Q96C10 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
DHX58Q96C10 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DHX58Q96C10 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DHX58Q96C10 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DHX58Q96C10 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DHX58Q96C10 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DHX58Q96C10 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DHX58Q96C10 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
DHX58Q96C10 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DHX58Q96C10 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DHX58Q96C10 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.3■□□□□ 0.84
DHX58Q96C10 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DHX58Q96C10 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DHX58Q96C10 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DHX58Q96C10 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.3■□□□□ 0.84
DHX58Q96C10 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
DHX58Q96C10 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DHX58Q96C10 TERF1P1-201ENST00000311003 1181 ntBASIC20.3■□□□□ 0.84
DHX58Q96C10 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms