Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
SYNE2Q8WXH0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC7.21□□□□□ -1.25
SYNE2Q8WXH0 AC006333.2-201ENST00000607957 2099 ntBASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 FAU-202ENST00000434372 533 ntTSL 2 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 AL023806.1-201ENST00000603994 1649 ntBASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 AL109659.2-201ENST00000606809 1674 ntBASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SYNE2Q8WXH0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 BTNL10-201ENST00000595971 695 ntBASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 MIR1247-201ENST00000408206 136 ntBASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 IDS-203ENST00000428056 1213 ntTSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 CROCCP4-201ENST00000457096 498 ntBASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 SDHAP3-202ENST00000515467 728 ntBASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 C9orf163-202ENST00000624034 2573 ntBASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 SDHAP1-207ENST00000440850 2000 ntBASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 RPS15P9-201ENST00000494093 319 ntBASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms