Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF139Q8WU17 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RNF139Q8WU17 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF139Q8WU17 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RNF139Q8WU17 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF139Q8WU17 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RNF139Q8WU17 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF139Q8WU17 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
RNF139Q8WU17 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RNF139Q8WU17 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.89■□□□□ 0.62
RNF139Q8WU17 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF139Q8WU17 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF139Q8WU17 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RNF139Q8WU17 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF139Q8WU17 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF139Q8WU17 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF139Q8WU17 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF139Q8WU17 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF139Q8WU17 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF139Q8WU17 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF139Q8WU17 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF139Q8WU17 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
RNF139Q8WU17 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF139Q8WU17 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF139Q8WU17 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF139Q8WU17 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF139Q8WU17 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF139Q8WU17 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF139Q8WU17 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF139Q8WU17 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF139Q8WU17 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF139Q8WU17 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF139Q8WU17 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF139Q8WU17 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF139Q8WU17 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF139Q8WU17 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 AL096828.2-201ENST00000567259 1965 ntBASIC18.88■□□□□ 0.61
RNF139Q8WU17 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 AC009154.2-201ENST00000621177 724 ntBASIC18.88■□□□□ 0.61
RNF139Q8WU17 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF139Q8WU17 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 REXO1L9P-201ENST00000604264 2108 ntBASIC18.88■□□□□ 0.61
RNF139Q8WU17 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF139Q8WU17 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 DRAXINP1-201ENST00000437611 948 ntBASIC18.87■□□□□ 0.61
RNF139Q8WU17 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 LINC00265-3P-201ENST00000447588 903 ntBASIC18.87■□□□□ 0.61
RNF139Q8WU17 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 RN7SL606P-201ENST00000472779 293 ntBASIC18.87■□□□□ 0.61
RNF139Q8WU17 VENTXP7-201ENST00000475503 772 ntBASIC18.87■□□□□ 0.61
RNF139Q8WU17 KRT18P56-201ENST00000507275 550 ntBASIC18.87■□□□□ 0.61
RNF139Q8WU17 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 LINC00167-201ENST00000530583 1419 ntBASIC18.87■□□□□ 0.61
RNF139Q8WU17 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.87■□□□□ 0.61
RNF139Q8WU17 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF139Q8WU17 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms