Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNIP1Q8TAD8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 AC009102.3-201ENST00000623118 1491 ntBASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 AC002310.6-201ENST00000624451 1377 ntBASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 AC005593.1-201ENST00000624894 515 ntBASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 HEIH-201ENST00000623091 1652 ntBASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNIP1Q8TAD8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 KRT18P27-201ENST00000427733 1299 ntBASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 MIR4469-201ENST00000583919 79 ntBASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 AC006557.2-201ENST00000592985 1240 ntBASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 AP000867.4-201ENST00000641616 219 ntBASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNIP1Q8TAD8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms