Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTL9Q8NET4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTL9Q8NET4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTL9Q8NET4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTL9Q8NET4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
RTL9Q8NET4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTL9Q8NET4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTL9Q8NET4 RPS2P28-201ENST00000314255 741 ntBASIC22.07■■□□□ 1.12
RTL9Q8NET4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.07■■□□□ 1.12
RTL9Q8NET4 MIR940-201ENST00000401276 94 ntBASIC22.07■■□□□ 1.12
RTL9Q8NET4 RPS2P1-201ENST00000434010 821 ntBASIC22.07■■□□□ 1.12
RTL9Q8NET4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTL9Q8NET4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTL9Q8NET4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
RTL9Q8NET4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
RTL9Q8NET4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC22.07■■□□□ 1.12
RTL9Q8NET4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.07■■□□□ 1.12
RTL9Q8NET4 SIGLEC16-201ENST00000599858 1437 ntBASIC22.07■■□□□ 1.12
RTL9Q8NET4 TERC-201ENST00000602385 541 ntBASIC22.07■■□□□ 1.12
RTL9Q8NET4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTL9Q8NET4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.07■■□□□ 1.12
RTL9Q8NET4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTL9Q8NET4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTL9Q8NET4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
RTL9Q8NET4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC22.07■■□□□ 1.12
RTL9Q8NET4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 AC093677.2-201ENST00000600169 1863 ntBASIC22.06■■□□□ 1.12
RTL9Q8NET4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 PGAM5P1-201ENST00000518923 814 ntBASIC22.06■■□□□ 1.12
RTL9Q8NET4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 CD63-204ENST00000546939 779 ntTSL 3 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 AC008735.5-201ENST00000623544 497 ntBASIC22.06■■□□□ 1.12
RTL9Q8NET4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 AIRN-201ENST00000601203 4374 ntBASIC22.06■■□□□ 1.12
RTL9Q8NET4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTL9Q8NET4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.06■■□□□ 1.12
RTL9Q8NET4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTL9Q8NET4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.05■■□□□ 1.12
RTL9Q8NET4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL9Q8NET4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.05■■□□□ 1.12
RTL9Q8NET4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
RTL9Q8NET4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
RTL9Q8NET4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL9Q8NET4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL9Q8NET4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.05■■□□□ 1.12
RTL9Q8NET4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTL9Q8NET4 COX5BP2-201ENST00000392354 334 ntBASIC22.05■■□□□ 1.12
RTL9Q8NET4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.05■■□□□ 1.12
RTL9Q8NET4 AC012640.2-201ENST00000561606 901 ntBASIC22.05■■□□□ 1.12
RTL9Q8NET4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC22.05■■□□□ 1.12
RTL9Q8NET4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.05■■□□□ 1.12
RTL9Q8NET4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL9Q8NET4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
RTL9Q8NET4 AC107918.4-202ENST00000641623 219 ntBASIC22.05■■□□□ 1.12
RTL9Q8NET4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL9Q8NET4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL9Q8NET4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL9Q8NET4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL9Q8NET4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL9Q8NET4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTL9Q8NET4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL9Q8NET4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTL9Q8NET4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.04■■□□□ 1.12
RTL9Q8NET4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTL9Q8NET4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTL9Q8NET4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
RTL9Q8NET4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTL9Q8NET4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
RTL9Q8NET4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTL9Q8NET4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.04■■□□□ 1.12
RTL9Q8NET4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.04■■□□□ 1.12
RTL9Q8NET4 OR7E14P-202ENST00000530490 1290 ntBASIC22.04■■□□□ 1.12
RTL9Q8NET4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.04■■□□□ 1.12
RTL9Q8NET4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTL9Q8NET4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.04■■□□□ 1.12
RTL9Q8NET4 MTDHP4-201ENST00000600287 670 ntBASIC22.04■■□□□ 1.12
RTL9Q8NET4 AL096828.2-201ENST00000567259 1965 ntBASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms