Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC17A8Q8NDX2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC17A8Q8NDX2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SLC17A8Q8NDX2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SLC17A8Q8NDX2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC17A8Q8NDX2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC17A8Q8NDX2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 SCARNA2-201ENST00000458748 420 ntBASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 IGHV3-22-201ENST00000520721 359 ntBASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 AL356488.2-201ENST00000602755 427 ntBASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC17A8Q8NDX2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC17A8Q8NDX2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 HLA-V-201ENST00000429037 534 ntBASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 AL136038.4-201ENST00000603606 1261 ntBASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC17A8Q8NDX2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 KRT89P-201ENST00000620027 1478 ntBASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC17A8Q8NDX2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms