Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PGBD3Q8N328 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.27■□□□□ 0.51
PGBD3Q8N328 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.27■□□□□ 0.51
PGBD3Q8N328 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PGBD3Q8N328 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 AL049812.1-201ENST00000432563 2267 ntBASIC18.26■□□□□ 0.51
PGBD3Q8N328 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PGBD3Q8N328 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.26■□□□□ 0.51
PGBD3Q8N328 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 MIR574-201ENST00000385209 96 ntBASIC18.26■□□□□ 0.51
PGBD3Q8N328 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.26■□□□□ 0.51
PGBD3Q8N328 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.26■□□□□ 0.51
PGBD3Q8N328 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.26■□□□□ 0.51
PGBD3Q8N328 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
PGBD3Q8N328 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PGBD3Q8N328 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD3Q8N328 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PGBD3Q8N328 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 MYLKP1-201ENST00000509077 1580 ntBASIC18.25■□□□□ 0.51
PGBD3Q8N328 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PGBD3Q8N328 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 AC068472.1-201ENST00000474589 881 ntBASIC18.25■□□□□ 0.51
PGBD3Q8N328 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.25■□□□□ 0.51
PGBD3Q8N328 SLC25A1P1-201ENST00000528351 927 ntBASIC18.25■□□□□ 0.51
PGBD3Q8N328 MTDHP3-201ENST00000594186 672 ntBASIC18.25■□□□□ 0.51
PGBD3Q8N328 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.25■□□□□ 0.51
PGBD3Q8N328 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.25■□□□□ 0.51
PGBD3Q8N328 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.25■□□□□ 0.51
PGBD3Q8N328 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PGBD3Q8N328 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 AC112777.1-201ENST00000540175 1423 ntBASIC18.24■□□□□ 0.51
PGBD3Q8N328 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 KRT18P13-201ENST00000400056 1290 ntBASIC18.24■□□□□ 0.51
PGBD3Q8N328 MIR940-201ENST00000401276 94 ntBASIC18.24■□□□□ 0.51
PGBD3Q8N328 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 RNPS1P1-201ENST00000507437 918 ntBASIC18.24■□□□□ 0.51
PGBD3Q8N328 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 AL671883.3-201ENST00000603274 991 ntBASIC18.24■□□□□ 0.51
PGBD3Q8N328 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms