Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 MINOS1P3-201ENST00000457048 203 ntBASIC16.71■□□□□ 0.27
BEST3Q8N1M1 EMBP1-201ENST00000458200 901 ntBASIC16.71■□□□□ 0.27
BEST3Q8N1M1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 HTR7P1-202ENST00000624664 4411 ntBASIC16.71■□□□□ 0.27
BEST3Q8N1M1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST3Q8N1M1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
BEST3Q8N1M1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
BEST3Q8N1M1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
BEST3Q8N1M1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 LINC01126-201ENST00000623515 1646 ntBASIC16.7■□□□□ 0.26
BEST3Q8N1M1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 NUS1P2-201ENST00000417358 873 ntBASIC16.7■□□□□ 0.26
BEST3Q8N1M1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.7■□□□□ 0.26
BEST3Q8N1M1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BEST3Q8N1M1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 CROCCP3-202ENST00000420820 1947 ntBASIC16.69■□□□□ 0.26
BEST3Q8N1M1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
BEST3Q8N1M1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BEST3Q8N1M1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
BEST3Q8N1M1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BEST3Q8N1M1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BEST3Q8N1M1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST3Q8N1M1 LINC00602-201ENST00000629776 2065 ntBASIC16.68■□□□□ 0.26
BEST3Q8N1M1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST3Q8N1M1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
BEST3Q8N1M1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
BEST3Q8N1M1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms