Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.02■□□□□ 0.31
CARFQ8N187 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CARFQ8N187 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CARFQ8N187 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CARFQ8N187 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CARFQ8N187 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.02■□□□□ 0.31
CARFQ8N187 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CARFQ8N187 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.01■□□□□ 0.31
CARFQ8N187 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.01■□□□□ 0.31
CARFQ8N187 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CARFQ8N187 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 AC135776.1-201ENST00000319817 2481 ntBASIC17.01■□□□□ 0.31
CARFQ8N187 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CARFQ8N187 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.01■□□□□ 0.31
CARFQ8N187 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.01■□□□□ 0.31
CARFQ8N187 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CARFQ8N187 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CARFQ8N187 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CARFQ8N187 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.01■□□□□ 0.31
CARFQ8N187 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.01■□□□□ 0.31
CARFQ8N187 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.01■□□□□ 0.31
CARFQ8N187 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CARFQ8N187 AD001527.2-201ENST00000622994 785 ntBASIC17.01■□□□□ 0.31
CARFQ8N187 TP73-AS1-207ENST00000624167 988 ntBASIC17.01■□□□□ 0.31
CARFQ8N187 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CARFQ8N187 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.01■□□□□ 0.31
CARFQ8N187 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.01■□□□□ 0.31
CARFQ8N187 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.01■□□□□ 0.31
CARFQ8N187 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 FLJ13224-201ENST00000313737 1514 ntBASIC17.01■□□□□ 0.31
CARFQ8N187 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CARFQ8N187 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.01■□□□□ 0.31
CARFQ8N187 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CARFQ8N187 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17■□□□□ 0.31
CARFQ8N187 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17■□□□□ 0.31
CARFQ8N187 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CARFQ8N187 AL356309.3-201ENST00000624132 1934 ntBASIC17■□□□□ 0.31
CARFQ8N187 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17■□□□□ 0.31
CARFQ8N187 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17■□□□□ 0.31
CARFQ8N187 AC018712.1-201ENST00000455767 687 ntBASIC17■□□□□ 0.31
CARFQ8N187 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
CARFQ8N187 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17■□□□□ 0.31
CARFQ8N187 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17■□□□□ 0.31
CARFQ8N187 AP001005.1-201ENST00000571755 1248 ntBASIC17■□□□□ 0.31
CARFQ8N187 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CARFQ8N187 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17■□□□□ 0.31
CARFQ8N187 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17■□□□□ 0.31
CARFQ8N187 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17■□□□□ 0.31
CARFQ8N187 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CARFQ8N187 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CARFQ8N187 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CARFQ8N187 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CARFQ8N187 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.99■□□□□ 0.31
CARFQ8N187 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CARFQ8N187 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CARFQ8N187 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CARFQ8N187 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CARFQ8N187 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CARFQ8N187 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CARFQ8N187 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CARFQ8N187 MRPL3P1-201ENST00000400109 1033 ntBASIC16.99■□□□□ 0.31
CARFQ8N187 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.99■□□□□ 0.31
CARFQ8N187 AC093909.1-201ENST00000504731 1122 ntBASIC16.99■□□□□ 0.31
CARFQ8N187 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CARFQ8N187 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CARFQ8N187 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.99■□□□□ 0.31
CARFQ8N187 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CARFQ8N187 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.99■□□□□ 0.31
CARFQ8N187 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms