Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 RPS15P9-201ENST00000494093 319 ntBASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 AL049757.1-201ENST00000616842 1596 ntBASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 AL020989.1-201ENST00000422979 469 ntBASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 AC005593.1-201ENST00000624894 515 ntBASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 ELL2P1-201ENST00000413990 1906 ntBASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 GPR89P-201ENST00000407924 1495 ntBASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 MIR4751-201ENST00000578027 74 ntBASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 AL596442.2-201ENST00000610240 980 ntBASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.82■□□□□ 0.28
COL27A1Q8IZC6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 AC073592.3-201ENST00000625118 1834 ntBASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 PDPK2P-202ENST00000562415 1191 ntBASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 AC100803.2-201ENST00000562459 1963 ntBASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.81■□□□□ 0.28
COL27A1Q8IZC6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 CYMP-203ENST00000474680 1263 ntBASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 AC005829.1-201ENST00000570002 483 ntBASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COL27A1Q8IZC6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms