Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 GUSBP12-201ENST00000513727 720 ntBASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 AC090616.6-201ENST00000582640 721 ntBASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 IGHV3-41-201ENST00000613121 348 ntBASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 AC124864.1-201ENST00000623408 392 ntBASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 AC026396.1-201ENST00000419388 421 ntBASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 TSSC2-201ENST00000450217 709 ntBASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 RN7SL606P-201ENST00000472779 293 ntBASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 AC100803.2-201ENST00000562459 1963 ntBASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 AL133373.2-201ENST00000623187 2828 ntBASIC18.92■□□□□ 0.62
SCUBE3Q8IX30 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 CHCHD2P8-201ENST00000429873 447 ntBASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
SCUBE3Q8IX30 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCUBE3Q8IX30 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms