Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 AC034232.1-201ENST00000506026 1064 ntBASIC18.75■□□□□ 0.59
RFX6Q8HWS3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.75■□□□□ 0.59
RFX6Q8HWS3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX6Q8HWS3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 AC008687.5-201ENST00000593746 558 ntBASIC18.74■□□□□ 0.59
RFX6Q8HWS3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 LINC00896-202ENST00000609602 2128 ntBASIC18.74■□□□□ 0.59
RFX6Q8HWS3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.74■□□□□ 0.59
RFX6Q8HWS3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX6Q8HWS3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.72■□□□□ 0.59
RFX6Q8HWS3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 COX11P1-201ENST00000489116 835 ntBASIC18.72■□□□□ 0.59
RFX6Q8HWS3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 AC073912.3-201ENST00000624414 853 ntBASIC18.72■□□□□ 0.59
RFX6Q8HWS3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX6Q8HWS3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms