Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 TUBB8P6-201ENST00000436895 1288 ntBASIC14.99□□□□□ -0.01
ZNF546Q86UE3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 KRT18P16-201ENST00000510337 1294 ntBASIC14.99□□□□□ -0.01
ZNF546Q86UE3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 AL121906.2-201ENST00000621597 723 ntBASIC14.99□□□□□ -0.01
ZNF546Q86UE3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 HYMAI-201ENST00000635591 3347 ntBASIC14.99□□□□□ -0.01
ZNF546Q86UE3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 LINC01126-201ENST00000623515 1646 ntBASIC14.99□□□□□ -0.01
ZNF546Q86UE3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF546Q86UE3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 AC087623.3-201ENST00000607047 1098 ntBASIC14.98□□□□□ -0.01
ZNF546Q86UE3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF546Q86UE3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 LINC00554-201ENST00000564841 3011 ntBASIC14.97□□□□□ -0.01
ZNF546Q86UE3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF546Q86UE3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms