Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.34■□□□□ 0.21
ATG4DQ86TL0 HYMAI.1-201ENST00000620949 238 ntBASIC16.34■□□□□ 0.21
ATG4DQ86TL0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.34■□□□□ 0.21
ATG4DQ86TL0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ATG4DQ86TL0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATG4DQ86TL0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
ATG4DQ86TL0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
ATG4DQ86TL0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.33■□□□□ 0.21
ATG4DQ86TL0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATG4DQ86TL0 LINC00896-202ENST00000609602 2128 ntBASIC16.33■□□□□ 0.21
ATG4DQ86TL0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 MIR662-201ENST00000384847 95 ntBASIC16.33■□□□□ 0.2
ATG4DQ86TL0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 AC112907.2-201ENST00000448639 330 ntBASIC16.33■□□□□ 0.2
ATG4DQ86TL0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 AC004263.2-201ENST00000617183 678 ntBASIC16.33■□□□□ 0.2
ATG4DQ86TL0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATG4DQ86TL0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 AL671277.2-201ENST00000458060 996 ntBASIC16.32■□□□□ 0.2
ATG4DQ86TL0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ATG4DQ86TL0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATG4DQ86TL0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATG4DQ86TL0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.31■□□□□ 0.2
ATG4DQ86TL0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATG4DQ86TL0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.31■□□□□ 0.2
ATG4DQ86TL0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATG4DQ86TL0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
ATG4DQ86TL0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms