Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 RNA5SP415-201ENST00000517246 115 ntBASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 MTDHP4-201ENST00000600287 670 ntBASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 AC025062.2-201ENST00000605477 670 ntBASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 Z83851.2-201ENST00000609564 659 ntBASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 AC079776.2-201ENST00000641154 1609 ntBASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 AL356309.3-201ENST00000624132 1934 ntBASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 AC007967.3-201ENST00000434308 558 ntBASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 FAM197Y3-203ENST00000618346 717 ntBASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAI1Q7Z5J4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 GMCL1P1-201ENST00000463439 1581 ntBASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 AC010460.3-201ENST00000511359 1579 ntBASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI1Q7Z5J4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
RAI1Q7Z5J4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAI1Q7Z5J4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.27■□□□□ 0.04
RAI1Q7Z5J4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAI1Q7Z5J4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAI1Q7Z5J4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms