Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 TERF1P1-201ENST00000311003 1181 ntBASIC20.3■□□□□ 0.84
SHC4Q6S5L8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 AC139887.4-201ENST00000607877 719 ntBASIC20.3■□□□□ 0.84
SHC4Q6S5L8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 KRT8P47-201ENST00000604727 1398 ntBASIC20.3■□□□□ 0.84
SHC4Q6S5L8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 LINC00304-203ENST00000565008 1864 ntBASIC20.29■□□□□ 0.84
SHC4Q6S5L8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.29■□□□□ 0.84
SHC4Q6S5L8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 AC113347.1-201ENST00000413321 391 ntBASIC20.29■□□□□ 0.84
SHC4Q6S5L8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 HLA-F-220ENST00000434407 884 ntBASIC20.29■□□□□ 0.84
SHC4Q6S5L8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 AC133963.1-201ENST00000504166 1679 ntBASIC20.29■□□□□ 0.84
SHC4Q6S5L8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHC4Q6S5L8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 AC080080.1-201ENST00000625121 2420 ntBASIC20.28■□□□□ 0.84
SHC4Q6S5L8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 LIN28AP1-201ENST00000429574 405 ntBASIC20.28■□□□□ 0.84
SHC4Q6S5L8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 AC092597.1-201ENST00000487352 616 ntBASIC20.28■□□□□ 0.84
SHC4Q6S5L8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC4Q6S5L8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.27■□□□□ 0.84
SHC4Q6S5L8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC4Q6S5L8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC4Q6S5L8 REXO1L11P-201ENST00000620964 1927 ntBASIC20.27■□□□□ 0.84
SHC4Q6S5L8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHC4Q6S5L8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC4Q6S5L8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC4Q6S5L8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC4Q6S5L8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.27■□□□□ 0.84
SHC4Q6S5L8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC4Q6S5L8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHC4Q6S5L8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC4Q6S5L8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHC4Q6S5L8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms