Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 AC005052.1-201ENST00000625181 2492 ntBASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TMEM53Q6P2H8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 CA15P1-201ENST00000481698 905 ntBASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 C2orf69P3-201ENST00000565542 1120 ntBASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 KRT8P3-201ENST00000519669 1449 ntBASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.53■□□□□ 0.24
TMEM53Q6P2H8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 TCAF2P1-201ENST00000291129 2421 ntBASIC16.52■□□□□ 0.24
TMEM53Q6P2H8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.52■□□□□ 0.23
TMEM53Q6P2H8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM53Q6P2H8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.52■□□□□ 0.23
TMEM53Q6P2H8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM53Q6P2H8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM53Q6P2H8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.52■□□□□ 0.23
TMEM53Q6P2H8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
TMEM53Q6P2H8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM53Q6P2H8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM53Q6P2H8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM53Q6P2H8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.52■□□□□ 0.23
TMEM53Q6P2H8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms