Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.31■□□□□ 0.04
C4orf46Q504U0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf46Q504U0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
C4orf46Q504U0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf46Q504U0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C4orf46Q504U0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
C4orf46Q504U0 PCDHB19P-201ENST00000570871 2371 ntBASIC15.31■□□□□ 0.04
C4orf46Q504U0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 KRT8P3-201ENST00000519669 1449 ntBASIC15.3■□□□□ 0.04
C4orf46Q504U0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
C4orf46Q504U0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C4orf46Q504U0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.29■□□□□ 0.04
C4orf46Q504U0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 AL355312.1-201ENST00000407115 2176 ntBASIC15.29■□□□□ 0.04
C4orf46Q504U0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 KRT18P55-202ENST00000578578 1546 ntBASIC15.29■□□□□ 0.04
C4orf46Q504U0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 HTR7P1-201ENST00000538670 1336 ntBASIC15.29■□□□□ 0.04
C4orf46Q504U0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.29■□□□□ 0.04
C4orf46Q504U0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C4orf46Q504U0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.29■□□□□ 0.04
C4orf46Q504U0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
C4orf46Q504U0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.28■□□□□ 0.04
C4orf46Q504U0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
C4orf46Q504U0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.28■□□□□ 0.04
C4orf46Q504U0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.28■□□□□ 0.04
C4orf46Q504U0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
C4orf46Q504U0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C4orf46Q504U0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C4orf46Q504U0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C4orf46Q504U0 CROCCP2-202ENST00000412962 2773 ntBASIC15.28■□□□□ 0.04
C4orf46Q504U0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C4orf46Q504U0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.28■□□□□ 0.04
C4orf46Q504U0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C4orf46Q504U0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.28■□□□□ 0.04
C4orf46Q504U0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
C4orf46Q504U0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms