Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 AC114341.1-201ENST00000618070 349 ntBASIC21.73■■□□□ 1.07
RFX7Q2KHR2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RFX7Q2KHR2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 RNA5SP419-201ENST00000515908 135 ntBASIC21.71■■□□□ 1.07
RFX7Q2KHR2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 AF238378.1-201ENST00000526806 358 ntBASIC21.71■■□□□ 1.07
RFX7Q2KHR2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
RFX7Q2KHR2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RFX7Q2KHR2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RFX7Q2KHR2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.7■■□□□ 1.07
RFX7Q2KHR2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.7■■□□□ 1.07
RFX7Q2KHR2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.7■■□□□ 1.06
RFX7Q2KHR2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms