Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CXCR4P61073 AC106886.4-201ENST00000623557 2502 ntBASIC16.42■□□□□ 0.22
CXCR4P61073 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CXCR4P61073 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.42■□□□□ 0.22
CXCR4P61073 DUTP2-201ENST00000519164 463 ntBASIC16.42■□□□□ 0.22
CXCR4P61073 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CXCR4P61073 AC011298.2-201ENST00000617989 482 ntBASIC16.42■□□□□ 0.22
CXCR4P61073 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CXCR4P61073 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 KRT16P1-201ENST00000399124 1418 ntBASIC16.42■□□□□ 0.22
CXCR4P61073 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CXCR4P61073 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CXCR4P61073 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CXCR4P61073 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.42■□□□□ 0.22
CXCR4P61073 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.42■□□□□ 0.22
CXCR4P61073 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.42■□□□□ 0.22
CXCR4P61073 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.42■□□□□ 0.22
CXCR4P61073 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.41■□□□□ 0.22
CXCR4P61073 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CXCR4P61073 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.41■□□□□ 0.22
CXCR4P61073 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CXCR4P61073 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CXCR4P61073 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CXCR4P61073 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CXCR4P61073 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CXCR4P61073 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CXCR4P61073 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
CXCR4P61073 MIR149-201ENST00000384879 89 ntBASIC16.41■□□□□ 0.22
CXCR4P61073 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CXCR4P61073 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.41■□□□□ 0.22
CXCR4P61073 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.41■□□□□ 0.22
CXCR4P61073 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CXCR4P61073 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CXCR4P61073 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CXCR4P61073 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CXCR4P61073 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.41■□□□□ 0.22
CXCR4P61073 LINC00304-203ENST00000565008 1864 ntBASIC16.41■□□□□ 0.22
CXCR4P61073 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CXCR4P61073 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CXCR4P61073 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.41■□□□□ 0.22
CXCR4P61073 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CXCR4P61073 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CXCR4P61073 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CXCR4P61073 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.4■□□□□ 0.22
CXCR4P61073 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.4■□□□□ 0.22
CXCR4P61073 AL163051.1-201ENST00000569214 1512 ntBASIC16.4■□□□□ 0.22
CXCR4P61073 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.4■□□□□ 0.22
CXCR4P61073 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.4■□□□□ 0.22
CXCR4P61073 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CXCR4P61073 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CXCR4P61073 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.4■□□□□ 0.22
CXCR4P61073 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.4■□□□□ 0.22
CXCR4P61073 AL353807.1-201ENST00000427475 662 ntBASIC16.4■□□□□ 0.22
CXCR4P61073 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.4■□□□□ 0.22
CXCR4P61073 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.4■□□□□ 0.22
CXCR4P61073 KRT18P6-201ENST00000555540 1265 ntBASIC16.4■□□□□ 0.22
CXCR4P61073 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.4■□□□□ 0.22
CXCR4P61073 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.4■□□□□ 0.22
CXCR4P61073 CR392000.1-201ENST00000624770 1228 ntBASIC16.4■□□□□ 0.22
CXCR4P61073 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.4■□□□□ 0.22
CXCR4P61073 AL031985.4-201ENST00000642138 673 ntBASIC16.4■□□□□ 0.22
CXCR4P61073 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.4■□□□□ 0.22
CXCR4P61073 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CXCR4P61073 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.4■□□□□ 0.22
CXCR4P61073 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.4■□□□□ 0.22
CXCR4P61073 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 HLA-J-201ENST00000462773 1622 ntBASIC16.4■□□□□ 0.22
CXCR4P61073 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.4■□□□□ 0.22
CXCR4P61073 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.4■□□□□ 0.22
CXCR4P61073 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms