Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.88□□□□□ -0.03
RIPPLY3P57055 LAGE3P1-201ENST00000425356 484 ntBASIC14.88□□□□□ -0.03
RIPPLY3P57055 CRB3P1-201ENST00000449338 276 ntBASIC14.88□□□□□ -0.03
RIPPLY3P57055 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIPPLY3P57055 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.88□□□□□ -0.03
RIPPLY3P57055 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIPPLY3P57055 AL589182.2-201ENST00000619332 1049 ntBASIC14.88□□□□□ -0.03
RIPPLY3P57055 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.88□□□□□ -0.03
RIPPLY3P57055 AP005117.1-201ENST00000584346 1413 ntBASIC14.88□□□□□ -0.03
RIPPLY3P57055 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.88□□□□□ -0.03
RIPPLY3P57055 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPPLY3P57055 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.88□□□□□ -0.03
RIPPLY3P57055 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPPLY3P57055 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RIPPLY3P57055 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
RIPPLY3P57055 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPPLY3P57055 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIPPLY3P57055 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RIPPLY3P57055 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPPLY3P57055 PHGDH-210ENST00000641115 1638 ntBASIC14.88□□□□□ -0.03
RIPPLY3P57055 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPPLY3P57055 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIPPLY3P57055 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RIPPLY3P57055 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPPLY3P57055 AC005332.8-201ENST00000622750 2735 ntBASIC14.87□□□□□ -0.03
RIPPLY3P57055 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 GPAT2P1-201ENST00000444924 1672 ntBASIC14.87□□□□□ -0.03
RIPPLY3P57055 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 NOC2LP1-202ENST00000452600 2235 ntBASIC14.87□□□□□ -0.03
RIPPLY3P57055 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 AC092506.1-202ENST00000401022 528 ntBASIC14.87□□□□□ -0.03
RIPPLY3P57055 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 AC108751.1-201ENST00000490852 363 ntBASIC14.87□□□□□ -0.03
RIPPLY3P57055 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 AC015911.4-201ENST00000588022 1070 ntBASIC14.87□□□□□ -0.03
RIPPLY3P57055 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 AL353135.1-201ENST00000606729 504 ntBASIC14.87□□□□□ -0.03
RIPPLY3P57055 AC092865.6-201ENST00000642101 219 ntBASIC14.87□□□□□ -0.03
RIPPLY3P57055 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RIPPLY3P57055 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPPLY3P57055 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPPLY3P57055 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPPLY3P57055 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIPPLY3P57055 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPPLY3P57055 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPPLY3P57055 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPPLY3P57055 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPPLY3P57055 TREX1-205ENST00000625293 1783 ntBASIC14.86□□□□□ -0.03
RIPPLY3P57055 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPPLY3P57055 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPPLY3P57055 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIPPLY3P57055 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RIPPLY3P57055 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIPPLY3P57055 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RIPPLY3P57055 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 AL031432.2-201ENST00000566714 459 ntBASIC14.86□□□□□ -0.03
RIPPLY3P57055 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 AL928711.1-201ENST00000570165 459 ntBASIC14.86□□□□□ -0.03
RIPPLY3P57055 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.86□□□□□ -0.03
RIPPLY3P57055 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms