Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLDN6P56747 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 AC009947.1-201ENST00000444350 727 ntBASIC17.24■□□□□ 0.35
CLDN6P56747 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN6P56747 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN6P56747 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.24■□□□□ 0.35
CLDN6P56747 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN6P56747 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.24■□□□□ 0.35
CLDN6P56747 AC107918.4-202ENST00000641623 219 ntBASIC17.24■□□□□ 0.35
CLDN6P56747 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
CLDN6P56747 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN6P56747 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN6P56747 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CLDN6P56747 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN6P56747 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN6P56747 MYLKP1-201ENST00000509077 1580 ntBASIC17.23■□□□□ 0.35
CLDN6P56747 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN6P56747 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN6P56747 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CLDN6P56747 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN6P56747 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN6P56747 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN6P56747 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLDN6P56747 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN6P56747 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLDN6P56747 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN6P56747 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLDN6P56747 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN6P56747 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN6P56747 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN6P56747 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN6P56747 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLDN6P56747 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.23■□□□□ 0.35
CLDN6P56747 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN6P56747 DNAJB3-201ENST00000446806 729 ntBASIC17.23■□□□□ 0.35
CLDN6P56747 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.23■□□□□ 0.35
CLDN6P56747 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN6P56747 AL139288.1-201ENST00000623748 933 ntBASIC17.23■□□□□ 0.35
CLDN6P56747 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN6P56747 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLDN6P56747 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN6P56747 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLDN6P56747 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLDN6P56747 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN6P56747 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CLDN6P56747 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN6P56747 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN6P56747 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN6P56747 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN6P56747 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN6P56747 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN6P56747 BX323043.1-201ENST00000641006 1765 ntBASIC17.23■□□□□ 0.35
CLDN6P56747 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN6P56747 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLDN6P56747 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN6P56747 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN6P56747 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN6P56747 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CLDN6P56747 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN6P56747 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLDN6P56747 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN6P56747 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN6P56747 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.22■□□□□ 0.35
CLDN6P56747 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN6P56747 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN6P56747 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
CLDN6P56747 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN6P56747 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLDN6P56747 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLDN6P56747 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN6P56747 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN6P56747 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN6P56747 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN6P56747 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN6P56747 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN6P56747 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN6P56747 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN6P56747 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN6P56747 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CLDN6P56747 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CLDN6P56747 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN6P56747 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.21■□□□□ 0.35
CLDN6P56747 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN6P56747 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN6P56747 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN6P56747 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms