Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 MTCL1P1-201ENST00000446207 792 ntBASIC17.91■□□□□ 0.46
ZNF140P52738 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF140P52738 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF140P52738 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 KRT18P35-201ENST00000510488 1269 ntBASIC17.91■□□□□ 0.46
ZNF140P52738 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.91■□□□□ 0.46
ZNF140P52738 AC116407.4-201ENST00000623319 1061 ntBASIC17.91■□□□□ 0.46
ZNF140P52738 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZNF140P52738 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ZNF140P52738 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ZNF140P52738 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF140P52738 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF140P52738 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF140P52738 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ZNF140P52738 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF140P52738 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF140P52738 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF140P52738 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF140P52738 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF140P52738 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
ZNF140P52738 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF140P52738 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF140P52738 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF140P52738 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ZNF140P52738 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF140P52738 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF140P52738 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
ZNF140P52738 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF140P52738 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 AC009949.1-201ENST00000623048 1830 ntBASIC17.89■□□□□ 0.45
ZNF140P52738 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ZNF140P52738 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.89■□□□□ 0.45
ZNF140P52738 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 RN7SL606P-201ENST00000472779 293 ntBASIC17.89■□□□□ 0.45
ZNF140P52738 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 KRT8P26-201ENST00000534154 1276 ntBASIC17.89■□□□□ 0.45
ZNF140P52738 AL445228.2-201ENST00000605589 952 ntBASIC17.89■□□□□ 0.45
ZNF140P52738 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.89■□□□□ 0.45
ZNF140P52738 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF140P52738 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ZNF140P52738 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF140P52738 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.89■□□□□ 0.45
ZNF140P52738 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF140P52738 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF140P52738 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF140P52738 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF140P52738 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF140P52738 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF140P52738 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF140P52738 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ZNF140P52738 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF140P52738 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF140P52738 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF140P52738 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF140P52738 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF140P52738 PCED1CP-201ENST00000419887 785 ntBASIC17.88■□□□□ 0.45
ZNF140P52738 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF140P52738 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.88■□□□□ 0.45
ZNF140P52738 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
ZNF140P52738 AC010331.1-201ENST00000611423 582 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms