Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MIR149-201ENST00000384879 89 ntBASIC20.02■□□□□ 0.8
BRCA2P51587 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.02■□□□□ 0.8
BRCA2P51587 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
BRCA2P51587 AC004706.3-202ENST00000621574 984 ntBASIC20.02■□□□□ 0.8
BRCA2P51587 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRCA2P51587 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRCA2P51587 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
BRCA2P51587 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
BRCA2P51587 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
BRCA2P51587 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.02■□□□□ 0.79
BRCA2P51587 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
BRCA2P51587 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.02■□□□□ 0.79
BRCA2P51587 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRCA2P51587 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCA2P51587 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCA2P51587 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCA2P51587 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCA2P51587 AC004461.1-201ENST00000412461 403 ntBASIC20.01■□□□□ 0.79
BRCA2P51587 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.01■□□□□ 0.79
BRCA2P51587 AC010654.1-201ENST00000615722 808 ntBASIC20.01■□□□□ 0.79
BRCA2P51587 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCA2P51587 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRCA2P51587 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCA2P51587 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRCA2P51587 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.01■□□□□ 0.79
BRCA2P51587 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.01■□□□□ 0.79
BRCA2P51587 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRCA2P51587 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.01■□□□□ 0.79
BRCA2P51587 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.01■□□□□ 0.79
BRCA2P51587 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
BRCA2P51587 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRCA2P51587 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20■□□□□ 0.79
BRCA2P51587 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRCA2P51587 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20■□□□□ 0.79
BRCA2P51587 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20■□□□□ 0.79
BRCA2P51587 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20■□□□□ 0.79
BRCA2P51587 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20■□□□□ 0.79
BRCA2P51587 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20■□□□□ 0.79
BRCA2P51587 MTCL1P1-201ENST00000446207 792 ntBASIC20■□□□□ 0.79
BRCA2P51587 AP005018.1-201ENST00000525475 301 ntBASIC20■□□□□ 0.79
BRCA2P51587 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRCA2P51587 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20■□□□□ 0.79
BRCA2P51587 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRCA2P51587 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRCA2P51587 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20■□□□□ 0.79
BRCA2P51587 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRCA2P51587 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20■□□□□ 0.79
BRCA2P51587 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRCA2P51587 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20■□□□□ 0.79
BRCA2P51587 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
BRCA2P51587 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
BRCA2P51587 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.99■□□□□ 0.79
BRCA2P51587 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.99■□□□□ 0.79
BRCA2P51587 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.99■□□□□ 0.79
BRCA2P51587 AD001527.2-201ENST00000622994 785 ntBASIC19.99■□□□□ 0.79
BRCA2P51587 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCA2P51587 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.99■□□□□ 0.79
BRCA2P51587 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
BRCA2P51587 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
BRCA2P51587 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCA2P51587 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCA2P51587 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCA2P51587 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
BRCA2P51587 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.99■□□□□ 0.79
BRCA2P51587 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.99■□□□□ 0.79
BRCA2P51587 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.99■□□□□ 0.79
BRCA2P51587 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.99■□□□□ 0.79
BRCA2P51587 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.99■□□□□ 0.79
BRCA2P51587 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCA2P51587 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.99■□□□□ 0.79
BRCA2P51587 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
BRCA2P51587 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.99■□□□□ 0.79
BRCA2P51587 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.99■□□□□ 0.79
BRCA2P51587 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BRCA2P51587 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.99■□□□□ 0.79
BRCA2P51587 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCA2P51587 OR8S1-201ENST00000310194 1080 ntBASIC19.99■□□□□ 0.79
BRCA2P51587 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
BRCA2P51587 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
BRCA2P51587 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.99■□□□□ 0.79
BRCA2P51587 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.99■□□□□ 0.79
BRCA2P51587 AL022326.1-202ENST00000641533 845 ntBASIC19.99■□□□□ 0.79
BRCA2P51587 AC092902.6-201ENST00000641783 218 ntBASIC19.99■□□□□ 0.79
BRCA2P51587 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCA2P51587 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BRCA2P51587 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
BRCA2P51587 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRCA2P51587 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.98■□□□□ 0.79
BRCA2P51587 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.98■□□□□ 0.79
BRCA2P51587 ELK2BP-201ENST00000415014 1224 ntBASIC19.98■□□□□ 0.79
BRCA2P51587 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BRCA2P51587 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BRCA2P51587 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BRCA2P51587 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.98■□□□□ 0.79
BRCA2P51587 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.98■□□□□ 0.79
BRCA2P51587 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.98■□□□□ 0.79
BRCA2P51587 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.98■□□□□ 0.79
BRCA2P51587 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRCA2P51587 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.98■□□□□ 0.79
BRCA2P51587 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms