Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
RNF144AP50876 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.27
RNF144AP50876 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF144AP50876 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RNF144AP50876 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNF144AP50876 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNF144AP50876 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF144AP50876 OR6D1P-202ENST00000641007 5290 ntBASIC16.76■□□□□ 0.27
RNF144AP50876 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RNF144AP50876 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF144AP50876 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF144AP50876 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF144AP50876 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RNF144AP50876 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF144AP50876 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RNF144AP50876 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF144AP50876 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF144AP50876 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF144AP50876 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF144AP50876 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNF144AP50876 AC138028.4-201ENST00000564984 1845 ntBASIC16.76■□□□□ 0.27
RNF144AP50876 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF144AP50876 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF144AP50876 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RNF144AP50876 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF144AP50876 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF144AP50876 AC092597.1-201ENST00000487352 616 ntBASIC16.76■□□□□ 0.27
RNF144AP50876 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF144AP50876 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF144AP50876 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF144AP50876 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF144AP50876 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF144AP50876 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF144AP50876 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF144AP50876 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF144AP50876 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF144AP50876 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.76■□□□□ 0.27
RNF144AP50876 AC012317.2-201ENST00000623305 2251 ntBASIC16.76■□□□□ 0.27
RNF144AP50876 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF144AP50876 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF144AP50876 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF144AP50876 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF144AP50876 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF144AP50876 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF144AP50876 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF144AP50876 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF144AP50876 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 AC104076.2-201ENST00000448912 469 ntBASIC16.75■□□□□ 0.27
RNF144AP50876 RASA4DP-201ENST00000460726 1199 ntBASIC16.75■□□□□ 0.27
RNF144AP50876 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF144AP50876 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF144AP50876 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF144AP50876 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF144AP50876 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RNF144AP50876 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RNF144AP50876 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF144AP50876 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF144AP50876 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF144AP50876 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF144AP50876 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RNF144AP50876 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF144AP50876 AP000523.1-201ENST00000398242 1049 ntBASIC16.74■□□□□ 0.27
RNF144AP50876 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF144AP50876 BX664615.1-201ENST00000443558 458 ntBASIC16.74■□□□□ 0.27
RNF144AP50876 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF144AP50876 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.74■□□□□ 0.27
RNF144AP50876 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF144AP50876 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF144AP50876 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF144AP50876 AC012183.1-201ENST00000625197 499 ntBASIC16.74■□□□□ 0.27
RNF144AP50876 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF144AP50876 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms