Protein–RNA interactions for Protein: P49848

TAF6, Transcription initiation factor TFIID subunit 6, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF6P49848 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.18■□□□□ 0.66
TAF6P49848 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.18■□□□□ 0.66
TAF6P49848 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TAF6P49848 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.18■□□□□ 0.66
TAF6P49848 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.18■□□□□ 0.66
TAF6P49848 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TAF6P49848 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TAF6P49848 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TAF6P49848 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TAF6P49848 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TAF6P49848 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TAF6P49848 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.18■□□□□ 0.66
TAF6P49848 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TAF6P49848 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TAF6P49848 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TAF6P49848 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TAF6P49848 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TAF6P49848 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TAF6P49848 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TAF6P49848 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.18■□□□□ 0.66
TAF6P49848 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.18■□□□□ 0.66
TAF6P49848 KRT8P47-201ENST00000604727 1398 ntBASIC19.18■□□□□ 0.66
TAF6P49848 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
TAF6P49848 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.17■□□□□ 0.66
TAF6P49848 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TAF6P49848 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.17■□□□□ 0.66
TAF6P49848 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TAF6P49848 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 AC004870.1-201ENST00000315132 882 ntBASIC19.17■□□□□ 0.66
TAF6P49848 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.17■□□□□ 0.66
TAF6P49848 RCN1P2-201ENST00000398357 915 ntBASIC19.17■□□□□ 0.66
TAF6P49848 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.17■□□□□ 0.66
TAF6P49848 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.17■□□□□ 0.66
TAF6P49848 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.17■□□□□ 0.66
TAF6P49848 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.17■□□□□ 0.66
TAF6P49848 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 MIR5100-201ENST00000579544 119 ntBASIC19.17■□□□□ 0.66
TAF6P49848 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TAF6P49848 AL591684.3-201ENST00000605187 298 ntBASIC19.17■□□□□ 0.66
TAF6P49848 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.17■□□□□ 0.66
TAF6P49848 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.17■□□□□ 0.66
TAF6P49848 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.17■□□□□ 0.66
TAF6P49848 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TAF6P49848 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF6P49848 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TAF6P49848 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TAF6P49848 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF6P49848 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF6P49848 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TAF6P49848 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TAF6P49848 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF6P49848 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TAF6P49848 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF6P49848 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF6P49848 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
TAF6P49848 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF6P49848 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF6P49848 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF6P49848 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF6P49848 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF6P49848 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.16■□□□□ 0.66
TAF6P49848 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TAF6P49848 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF6P49848 AC011467.2-201ENST00000598425 242 ntBASIC19.16■□□□□ 0.66
TAF6P49848 AC097374.2-201ENST00000618617 1306 ntBASIC19.16■□□□□ 0.66
TAF6P49848 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF6P49848 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF6P49848 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF6P49848 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF6P49848 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF6P49848 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF6P49848 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF6P49848 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TAF6P49848 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.15■□□□□ 0.66
TAF6P49848 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF6P49848 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF6P49848 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF6P49848 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF6P49848 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TAF6P49848 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TAF6P49848 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TAF6P49848 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TAF6P49848 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF6P49848 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF6P49848 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
TAF6P49848 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.15■□□□□ 0.66
TAF6P49848 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.15■□□□□ 0.66
TAF6P49848 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms