Protein–RNA interactions for Protein: P49336

CDK8, Cyclin-dependent kinase 8, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK8P49336 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.05■□□□□ 0.96
CDK8P49336 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK8P49336 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK8P49336 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDK8P49336 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.05■□□□□ 0.96
CDK8P49336 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDK8P49336 REXO1L9P-201ENST00000604264 2108 ntBASIC21.05■□□□□ 0.96
CDK8P49336 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK8P49336 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK8P49336 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDK8P49336 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDK8P49336 HLA-A-201ENST00000376802 1334 ntBASIC21.04■□□□□ 0.96
CDK8P49336 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK8P49336 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK8P49336 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.04■□□□□ 0.96
CDK8P49336 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.04■□□□□ 0.96
CDK8P49336 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK8P49336 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK8P49336 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CDK8P49336 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.04■□□□□ 0.96
CDK8P49336 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK8P49336 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.04■□□□□ 0.96
CDK8P49336 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK8P49336 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.04■□□□□ 0.96
CDK8P49336 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.04■□□□□ 0.96
CDK8P49336 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.04■□□□□ 0.96
CDK8P49336 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.04■□□□□ 0.96
CDK8P49336 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.04■□□□□ 0.96
CDK8P49336 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDK8P49336 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDK8P49336 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK8P49336 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDK8P49336 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.04■□□□□ 0.96
CDK8P49336 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDK8P49336 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CDK8P49336 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDK8P49336 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK8P49336 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK8P49336 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
CDK8P49336 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.04■□□□□ 0.96
CDK8P49336 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDK8P49336 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.03■□□□□ 0.96
CDK8P49336 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CDK8P49336 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDK8P49336 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.03■□□□□ 0.96
CDK8P49336 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDK8P49336 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.03■□□□□ 0.96
CDK8P49336 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDK8P49336 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.03■□□□□ 0.96
CDK8P49336 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CDK8P49336 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.03■□□□□ 0.96
CDK8P49336 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.03■□□□□ 0.96
CDK8P49336 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDK8P49336 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDK8P49336 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CDK8P49336 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDK8P49336 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CDK8P49336 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.03■□□□□ 0.96
CDK8P49336 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.03■□□□□ 0.96
CDK8P49336 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDK8P49336 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDK8P49336 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.03■□□□□ 0.96
CDK8P49336 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDK8P49336 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.03■□□□□ 0.96
CDK8P49336 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDK8P49336 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.03■□□□□ 0.96
CDK8P49336 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.03■□□□□ 0.96
CDK8P49336 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDK8P49336 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.02■□□□□ 0.96
CDK8P49336 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CDK8P49336 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.02■□□□□ 0.96
CDK8P49336 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 RNA5SP419-201ENST00000515908 135 ntBASIC21.02■□□□□ 0.96
CDK8P49336 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.02■□□□□ 0.96
CDK8P49336 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.02■□□□□ 0.96
CDK8P49336 AC148477.8-201ENST00000624298 468 ntBASIC21.02■□□□□ 0.96
CDK8P49336 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
CDK8P49336 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.02■□□□□ 0.96
CDK8P49336 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 AC100803.2-201ENST00000562459 1963 ntBASIC21.02■□□□□ 0.96
CDK8P49336 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
CDK8P49336 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.02■□□□□ 0.96
CDK8P49336 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CDK8P49336 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDK8P49336 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CDK8P49336 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDK8P49336 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDK8P49336 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.01■□□□□ 0.95
CDK8P49336 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms