Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC12.34□□□□□ -0.43
PCP4P48539 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
PCP4P48539 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.34□□□□□ -0.43
PCP4P48539 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.34□□□□□ -0.43
PCP4P48539 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PCP4P48539 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
PCP4P48539 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.34□□□□□ -0.43
PCP4P48539 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.34□□□□□ -0.43
PCP4P48539 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PCP4P48539 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.34□□□□□ -0.43
PCP4P48539 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PCP4P48539 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
PCP4P48539 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC12.34□□□□□ -0.43
PCP4P48539 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
PCP4P48539 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCP4P48539 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.33□□□□□ -0.43
PCP4P48539 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.33□□□□□ -0.43
PCP4P48539 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
PCP4P48539 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
PCP4P48539 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
PCP4P48539 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
PCP4P48539 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
PCP4P48539 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
PCP4P48539 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
PCP4P48539 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.33□□□□□ -0.44
PCP4P48539 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.33□□□□□ -0.44
PCP4P48539 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.33□□□□□ -0.44
PCP4P48539 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
PCP4P48539 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
PCP4P48539 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.33□□□□□ -0.44
PCP4P48539 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCP4P48539 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
PCP4P48539 CYP2T1P-202ENST00000641596 2535 ntBASIC12.33□□□□□ -0.44
PCP4P48539 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
PCP4P48539 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
PCP4P48539 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PCP4P48539 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC12.32□□□□□ -0.44
PCP4P48539 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
PCP4P48539 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 AC005915.1-201ENST00000624912 2018 ntBASIC12.32□□□□□ -0.44
PCP4P48539 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.32□□□□□ -0.44
PCP4P48539 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC12.32□□□□□ -0.44
PCP4P48539 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.32□□□□□ -0.44
PCP4P48539 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCP4P48539 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PCP4P48539 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PCP4P48539 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms