Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.04■□□□□ 0.48
ARCN1P48444 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ARCN1P48444 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.04■□□□□ 0.48
ARCN1P48444 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.04■□□□□ 0.48
ARCN1P48444 KRT89P-201ENST00000620027 1478 ntBASIC18.04■□□□□ 0.48
ARCN1P48444 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ARCN1P48444 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 FAM8A6P-201ENST00000407496 1135 ntBASIC18.04■□□□□ 0.48
ARCN1P48444 SPDYE15P-201ENST00000424157 909 ntBASIC18.04■□□□□ 0.48
ARCN1P48444 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.04■□□□□ 0.48
ARCN1P48444 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.04■□□□□ 0.48
ARCN1P48444 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.04■□□□□ 0.48
ARCN1P48444 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.04■□□□□ 0.48
ARCN1P48444 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.04■□□□□ 0.48
ARCN1P48444 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
ARCN1P48444 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.04■□□□□ 0.48
ARCN1P48444 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.04■□□□□ 0.48
ARCN1P48444 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.04■□□□□ 0.48
ARCN1P48444 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.04■□□□□ 0.48
ARCN1P48444 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
ARCN1P48444 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.04■□□□□ 0.48
ARCN1P48444 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARCN1P48444 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
ARCN1P48444 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.03■□□□□ 0.48
ARCN1P48444 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.03■□□□□ 0.48
ARCN1P48444 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
ARCN1P48444 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 STARP1-201ENST00000397973 869 ntBASIC18.03■□□□□ 0.48
ARCN1P48444 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.03■□□□□ 0.48
ARCN1P48444 HLA-F-220ENST00000434407 884 ntBASIC18.03■□□□□ 0.48
ARCN1P48444 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.03■□□□□ 0.48
ARCN1P48444 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.03■□□□□ 0.48
ARCN1P48444 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.03■□□□□ 0.48
ARCN1P48444 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.03■□□□□ 0.48
ARCN1P48444 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 AC024563.2-201ENST00000603282 481 ntBASIC18.03■□□□□ 0.48
ARCN1P48444 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.03■□□□□ 0.48
ARCN1P48444 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.03■□□□□ 0.48
ARCN1P48444 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARCN1P48444 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ARCN1P48444 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ARCN1P48444 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.02■□□□□ 0.48
ARCN1P48444 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
ARCN1P48444 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.02■□□□□ 0.48
ARCN1P48444 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.02■□□□□ 0.48
ARCN1P48444 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARCN1P48444 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARCN1P48444 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ARCN1P48444 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.02■□□□□ 0.48
ARCN1P48444 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.02■□□□□ 0.48
ARCN1P48444 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ARCN1P48444 HOMER2P1-201ENST00000455653 964 ntBASIC18.02■□□□□ 0.48
ARCN1P48444 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.02■□□□□ 0.48
ARCN1P48444 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARCN1P48444 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ARCN1P48444 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.02■□□□□ 0.48
ARCN1P48444 AL136038.4-201ENST00000603606 1261 ntBASIC18.02■□□□□ 0.48
ARCN1P48444 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ARCN1P48444 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.02■□□□□ 0.48
ARCN1P48444 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ARCN1P48444 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ARCN1P48444 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARCN1P48444 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ARCN1P48444 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARCN1P48444 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ARCN1P48444 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARCN1P48444 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.02■□□□□ 0.47
ARCN1P48444 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms