Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
MMP13P45452 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP13P45452 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.74■□□□□ 0.59
MMP13P45452 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.73■□□□□ 0.59
MMP13P45452 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
MMP13P45452 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MMP13P45452 RNF152P1-201ENST00000397754 604 ntBASIC18.73■□□□□ 0.59
MMP13P45452 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.73■□□□□ 0.59
MMP13P45452 AC104076.2-201ENST00000448912 469 ntBASIC18.73■□□□□ 0.59
MMP13P45452 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
MMP13P45452 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.73■□□□□ 0.59
MMP13P45452 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MMP13P45452 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
MMP13P45452 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.73■□□□□ 0.59
MMP13P45452 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MMP13P45452 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.73■□□□□ 0.59
MMP13P45452 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP13P45452 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
MMP13P45452 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MMP13P45452 SDHAP2-201ENST00000455183 2001 ntBASIC18.73■□□□□ 0.59
MMP13P45452 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.72■□□□□ 0.59
MMP13P45452 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MMP13P45452 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
MMP13P45452 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP13P45452 HCG11-201ENST00000411553 5696 ntBASIC18.72■□□□□ 0.59
MMP13P45452 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
MMP13P45452 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
MMP13P45452 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP13P45452 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
MMP13P45452 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
MMP13P45452 TSPY5P-201ENST00000426936 936 ntBASIC18.72■□□□□ 0.59
MMP13P45452 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.72■□□□□ 0.59
MMP13P45452 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
MMP13P45452 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.72■□□□□ 0.59
MMP13P45452 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 AL157888.1-201ENST00000631930 593 ntBASIC18.72■□□□□ 0.59
MMP13P45452 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP13P45452 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP13P45452 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP13P45452 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MMP13P45452 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.71■□□□□ 0.59
MMP13P45452 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.71■□□□□ 0.59
MMP13P45452 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP13P45452 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MMP13P45452 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP13P45452 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP13P45452 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP13P45452 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.71■□□□□ 0.59
MMP13P45452 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.71■□□□□ 0.59
MMP13P45452 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP13P45452 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.71■□□□□ 0.59
MMP13P45452 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.71■□□□□ 0.59
MMP13P45452 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
MMP13P45452 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.71■□□□□ 0.59
MMP13P45452 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP13P45452 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.71■□□□□ 0.59
MMP13P45452 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP13P45452 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.71■□□□□ 0.59
MMP13P45452 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.71■□□□□ 0.59
MMP13P45452 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.71■□□□□ 0.59
MMP13P45452 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP13P45452 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP13P45452 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP13P45452 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP13P45452 AD000864.1-201ENST00000624076 2295 ntBASIC18.71■□□□□ 0.59
MMP13P45452 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
MMP13P45452 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.71■□□□□ 0.59
MMP13P45452 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MMP13P45452 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
MMP13P45452 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP13P45452 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms