Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.16■□□□□ 0.66
SSR1P43307 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.16■□□□□ 0.66
SSR1P43307 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SSR1P43307 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR1P43307 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR1P43307 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSR1P43307 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.16■□□□□ 0.66
SSR1P43307 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSR1P43307 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.16■□□□□ 0.66
SSR1P43307 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSR1P43307 AC104390.1-201ENST00000555663 520 ntBASIC19.16■□□□□ 0.66
SSR1P43307 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.16■□□□□ 0.66
SSR1P43307 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SSR1P43307 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR1P43307 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.16■□□□□ 0.66
SSR1P43307 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSR1P43307 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SSR1P43307 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.16■□□□□ 0.66
SSR1P43307 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.16■□□□□ 0.66
SSR1P43307 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SSR1P43307 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SSR1P43307 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSR1P43307 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR1P43307 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.16■□□□□ 0.66
SSR1P43307 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR1P43307 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.15■□□□□ 0.66
SSR1P43307 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.15■□□□□ 0.66
SSR1P43307 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.15■□□□□ 0.66
SSR1P43307 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.15■□□□□ 0.66
SSR1P43307 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.15■□□□□ 0.66
SSR1P43307 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.15■□□□□ 0.66
SSR1P43307 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.15■□□□□ 0.66
SSR1P43307 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
SSR1P43307 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SSR1P43307 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SSR1P43307 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.15■□□□□ 0.66
SSR1P43307 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.15■□□□□ 0.66
SSR1P43307 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.15■□□□□ 0.66
SSR1P43307 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SSR1P43307 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SSR1P43307 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
SSR1P43307 LINC01568-207ENST00000641790 1380 ntBASIC19.15■□□□□ 0.66
SSR1P43307 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.15■□□□□ 0.66
SSR1P43307 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSR1P43307 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.15■□□□□ 0.66
SSR1P43307 MST1L-201ENST00000442552 2185 ntBASIC19.15■□□□□ 0.66
SSR1P43307 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.14■□□□□ 0.66
SSR1P43307 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SSR1P43307 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
SSR1P43307 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SSR1P43307 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SSR1P43307 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.14■□□□□ 0.65
SSR1P43307 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.14■□□□□ 0.65
SSR1P43307 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.14■□□□□ 0.65
SSR1P43307 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
SSR1P43307 AC010240.3-201ENST00000607688 395 ntBASIC19.14■□□□□ 0.65
SSR1P43307 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.14■□□□□ 0.65
SSR1P43307 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.14■□□□□ 0.65
SSR1P43307 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.14■□□□□ 0.65
SSR1P43307 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.14■□□□□ 0.65
SSR1P43307 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.14■□□□□ 0.65
SSR1P43307 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SSR1P43307 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.14■□□□□ 0.65
SSR1P43307 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SSR1P43307 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR1P43307 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SSR1P43307 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.14■□□□□ 0.65
SSR1P43307 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.13■□□□□ 0.65
SSR1P43307 AP000997.3-201ENST00000623333 2250 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms