Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCCBP05166 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCCBP05166 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCCBP05166 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCCBP05166 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCCBP05166 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PCCBP05166 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCCBP05166 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.8■□□□□ 0.44
PCCBP05166 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.8■□□□□ 0.44
PCCBP05166 TP73-AS1-210ENST00000637775 1455 ntBASIC17.8■□□□□ 0.44
PCCBP05166 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCCBP05166 AC090164.3-201ENST00000610780 2143 ntBASIC17.8■□□□□ 0.44
PCCBP05166 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.79■□□□□ 0.44
PCCBP05166 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCCBP05166 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.79■□□□□ 0.44
PCCBP05166 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.79■□□□□ 0.44
PCCBP05166 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCCBP05166 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCCBP05166 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCCBP05166 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCCBP05166 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.79■□□□□ 0.44
PCCBP05166 RCN1P2-201ENST00000398357 915 ntBASIC17.79■□□□□ 0.44
PCCBP05166 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCCBP05166 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.79■□□□□ 0.44
PCCBP05166 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.79■□□□□ 0.44
PCCBP05166 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.79■□□□□ 0.44
PCCBP05166 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.79■□□□□ 0.44
PCCBP05166 AL138831.2-201ENST00000606564 490 ntBASIC17.79■□□□□ 0.44
PCCBP05166 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.79■□□□□ 0.44
PCCBP05166 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCCBP05166 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCCBP05166 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCCBP05166 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.79■□□□□ 0.44
PCCBP05166 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.79■□□□□ 0.44
PCCBP05166 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
PCCBP05166 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.79■□□□□ 0.44
PCCBP05166 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCCBP05166 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCCBP05166 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCCBP05166 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.79■□□□□ 0.44
PCCBP05166 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCCBP05166 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCCBP05166 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCCBP05166 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.79■□□□□ 0.44
PCCBP05166 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.79■□□□□ 0.44
PCCBP05166 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PCCBP05166 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PCCBP05166 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCCBP05166 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.78■□□□□ 0.44
PCCBP05166 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 FAAHP1-202ENST00000446499 1238 ntBASIC17.78■□□□□ 0.44
PCCBP05166 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.78■□□□□ 0.44
PCCBP05166 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.78■□□□□ 0.44
PCCBP05166 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.78■□□□□ 0.44
PCCBP05166 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
PCCBP05166 AC009533.2-201ENST00000543664 586 ntBASIC17.78■□□□□ 0.44
PCCBP05166 MIR5100-201ENST00000579544 119 ntBASIC17.78■□□□□ 0.44
PCCBP05166 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.78■□□□□ 0.44
PCCBP05166 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCCBP05166 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.78■□□□□ 0.44
PCCBP05166 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.78■□□□□ 0.44
PCCBP05166 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.78■□□□□ 0.44
PCCBP05166 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCCBP05166 AC125634.1-201ENST00000438758 1403 ntBASIC17.78■□□□□ 0.44
PCCBP05166 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
PCCBP05166 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCCBP05166 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCCBP05166 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.78■□□□□ 0.44
PCCBP05166 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PCCBP05166 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCCBP05166 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
PCCBP05166 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PCCBP05166 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCCBP05166 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCCBP05166 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCCBP05166 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCCBP05166 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.77■□□□□ 0.44
PCCBP05166 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
PCCBP05166 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.77■□□□□ 0.44
PCCBP05166 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCCBP05166 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCCBP05166 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms