Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
P04436 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.43■□□□□ 0.22
P04436 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
P04436 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.43■□□□□ 0.22
P04436 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.43■□□□□ 0.22
P04436 AC096582.2-201ENST00000510860 516 ntBASIC16.43■□□□□ 0.22
P04436 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.43■□□□□ 0.22
P04436 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.43■□□□□ 0.22
P04436 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.43■□□□□ 0.22
P04436 IFNL4P1-201ENST00000607083 540 ntBASIC16.43■□□□□ 0.22
P04436 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
P04436 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.43■□□□□ 0.22
P04436 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.43■□□□□ 0.22
P04436 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
P04436 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.43■□□□□ 0.22
P04436 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
P04436 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.43■□□□□ 0.22
P04436 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
P04436 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
P04436 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
P04436 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
P04436 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.42■□□□□ 0.22
P04436 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.42■□□□□ 0.22
P04436 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.42■□□□□ 0.22
P04436 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.42■□□□□ 0.22
P04436 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.42■□□□□ 0.22
P04436 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.42■□□□□ 0.22
P04436 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.42■□□□□ 0.22
P04436 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.42■□□□□ 0.22
P04436 AC009533.2-201ENST00000543664 586 ntBASIC16.42■□□□□ 0.22
P04436 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.42■□□□□ 0.22
P04436 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.42■□□□□ 0.22
P04436 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.42■□□□□ 0.22
P04436 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.42■□□□□ 0.22
P04436 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 AL121894.2-201ENST00000602977 491 ntBASIC16.42■□□□□ 0.22
P04436 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.42■□□□□ 0.22
P04436 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
P04436 AC132938.6-201ENST00000623828 1655 ntBASIC16.42■□□□□ 0.22
P04436 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
P04436 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.42■□□□□ 0.22
P04436 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.41■□□□□ 0.22
P04436 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.41■□□□□ 0.22
P04436 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.41■□□□□ 0.22
P04436 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.41■□□□□ 0.22
P04436 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.41■□□□□ 0.22
P04436 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.41■□□□□ 0.22
P04436 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 RN7SL510P-201ENST00000581311 263 ntBASIC16.41■□□□□ 0.22
P04436 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.41■□□□□ 0.22
P04436 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.41■□□□□ 0.22
P04436 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.41■□□□□ 0.22
P04436 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
P04436 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
P04436 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.4■□□□□ 0.22
P04436 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
P04436 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04436 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.4■□□□□ 0.22
P04436 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms