Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 AL589743.5-201ENST00000616611 1050 ntBASIC13.57□□□□□ -0.24
HLA-DQA1P01909 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 AL357033.4-201ENST00000617703 1807 ntBASIC13.57□□□□□ -0.24
HLA-DQA1P01909 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DQA1P01909 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 KRT8P32-201ENST00000512863 1461 ntBASIC13.56□□□□□ -0.24
HLA-DQA1P01909 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 AGGF1P2-201ENST00000426656 2106 ntBASIC13.56□□□□□ -0.24
HLA-DQA1P01909 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 OR10C1-204ENST00000622521 1039 ntBASIC13.56□□□□□ -0.24
HLA-DQA1P01909 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 AL355312.1-201ENST00000407115 2176 ntBASIC13.56□□□□□ -0.24
HLA-DQA1P01909 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA1P01909 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.55□□□□□ -0.24
HLA-DQA1P01909 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms